WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35D6.1b.1 Sequence Name  F35D6.1b.1
Length (nt)  2348   Chromosome Location  IV: 5533140-5537962
Chromosome . Primary Identifier  IV Chromosome Location . Start  5533140
Chromosome Location . End  5537962 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35D6.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001411 fem-1 F35D6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35D6.1b F35D6.1b 315   IV: 5537403-5537455

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35D6.1b.1 5533140 5537962 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon122892   386   IV: 5533140-5533525 Caenorhabditis elegans
Exon122895   716   IV: 5534125-5534840 Caenorhabditis elegans
Exon122897   146   IV: 5534907-5535052 Caenorhabditis elegans
Exon122899   117   IV: 5536526-5536642 Caenorhabditis elegans
Exon122901   366   IV: 5536689-5537054 Caenorhabditis elegans
Exon122903   89   IV: 5537110-5537198 Caenorhabditis elegans
Exon122905   106   IV: 5537246-5537351 Caenorhabditis elegans
Exon122907   54   IV: 5537402-5537455 Caenorhabditis elegans
Exon122909   61   IV: 5537498-5537558 Caenorhabditis elegans
Exon122911   126   IV: 5537603-5537728 Caenorhabditis elegans
Exon122913   181   IV: 5537782-5537962 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35D6.1b.1 5533140 5537962 -1

1 Sequence

Length
2348

1 Sequence Ontology Term

Identifier Name Description
transcript