WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12E12.2.1 Sequence Name  T12E12.2.1
Length (nt)  2989   Chromosome Location  IV: 5544860-5548459
Chromosome . Primary Identifier  IV Chromosome Location . Start  5544860
Chromosome Location . End  5548459 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12E12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020463 cec-6 T12E12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12E12.2 T12E12.2 2676   IV: 5544860-5545015

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12E12.2.1 5544860 5548459 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon122933   156   IV: 5544860-5545015 Caenorhabditis elegans
Exon122934   765   IV: 5545428-5546192 Caenorhabditis elegans
Exon122935   742   IV: 5546241-5546982 Caenorhabditis elegans
Exon122936   444   IV: 5547034-5547477 Caenorhabditis elegans
Exon122937   346   IV: 5547525-5547870 Caenorhabditis elegans
Exon122938   536   IV: 5547924-5548459 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12E12.2.1 5544860 5548459 1

1 Sequence

Length
2989

1 Sequence Ontology Term

Identifier Name Description
transcript