WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26D12.1a.1 Sequence Name  F26D12.1a.1
Length (nt)  3079   Chromosome Location  IV: 5584684-5610371
Chromosome . Primary Identifier  IV Chromosome Location . Start  5584684
Chromosome Location . End  5610371 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26D12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001439 fkh-7 F26D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26D12.1a F26D12.1a 2337   IV: 5584684-5585184

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26D12.1a.1 5584684 5610371 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon123023   501   IV: 5584684-5585184 Caenorhabditis elegans
Exon123084   210   IV: 5601650-5601859 Caenorhabditis elegans
Exon123095   368   IV: 5602272-5602639 Caenorhabditis elegans
Exon123103   256   IV: 5602841-5603096 Caenorhabditis elegans
Exon123123   326   IV: 5606116-5606441 Caenorhabditis elegans
Exon123136   163   IV: 5606558-5606720 Caenorhabditis elegans
Exon123153   162   IV: 5607832-5607993 Caenorhabditis elegans
Exon123166   133   IV: 5608312-5608444 Caenorhabditis elegans
Exon123181   153   IV: 5608498-5608650 Caenorhabditis elegans
Exon123209   807   IV: 5609565-5610371 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26D12.1a.1 5584684 5610371 1

1 Sequence

Length
3079

1 Sequence Ontology Term

Identifier Name Description
transcript