WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:C39H7.9b Sequence Name  C39H7.9b
Length (nt)  703   Chromosome Location  IV: 5615522-5619685
Chromosome . Primary Identifier  IV Chromosome Location . Start  5615522
Chromosome Location . End  5619685 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39H7.9b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044125 srsx-16 C39H7.9 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C39H7.9b 5615522 5619685 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon123233   189   IV: 5615522-5615710 Caenorhabditis elegans
Exon123237   170   IV: 5616270-5616439 Caenorhabditis elegans
Exon123244   124   IV: 5618124-5618247 Caenorhabditis elegans
Exon123251   81   IV: 5619094-5619174 Caenorhabditis elegans
Exon123254   139   IV: 5619547-5619685 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C39H7.9b 5615522 5619685 -1

1 Sequence

Length
703

1 Sequence Ontology Term

Identifier Name Description
transcript