WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39H7.6.1 Sequence Name  C39H7.6.1
Length (nt)  1036   Chromosome Location  IV: 5628751-5630256
Chromosome . Primary Identifier  IV Chromosome Location . Start  5628751
Chromosome Location . End  5630256 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39H7.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005090 srd-12 C39H7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39H7.6 C39H7.6 978   IV: 5628792-5629067

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C39H7.6.1 5628751 5630256 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon123287   317   IV: 5628751-5629067 Caenorhabditis elegans
Exon123290   427   IV: 5629313-5629739 Caenorhabditis elegans
Exon123293   292   IV: 5629965-5630256 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C39H7.6.1 5628751 5630256 -1

1 Sequence

Length
1036

1 Sequence Ontology Term

Identifier Name Description
transcript