WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19E7.2b.1 Sequence Name  T19E7.2b.1
Length (nt)  1746   Chromosome Location  IV: 5651085-5653229
Chromosome . Primary Identifier  IV Chromosome Location . Start  5651085
Chromosome Location . End  5653229 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19E7.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004804 skn-1 T19E7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19E7.2b T19E7.2b 933   IV: 5651764-5651840

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19E7.2b.1 5651085 5653229 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon123356   756   IV: 5651085-5651840 Caenorhabditis elegans
Exon123360   368   IV: 5651893-5652260 Caenorhabditis elegans
Exon123365   259   IV: 5652414-5652672 Caenorhabditis elegans
Exon123367   363   IV: 5652867-5653229 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19E7.2b.1 5651085 5653229 -1

1 Sequence

Length
1746

1 Sequence Ontology Term

Identifier Name Description
transcript