WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19E7.3a.1 Sequence Name  T19E7.3a.1
Length (nt)  1335   Chromosome Location  IV: 5661141-5664425
Chromosome . Primary Identifier  IV Chromosome Location . Start  5661141
Chromosome Location . End  5664425 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19E7.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000247 bec-1 T19E7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19E7.3a T19E7.3a 1128   IV: 5661340-5661525

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19E7.3a.1 5661141 5664425 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon123381   385   IV: 5661141-5661525 Caenorhabditis elegans
Exon123384   210   IV: 5662137-5662346 Caenorhabditis elegans
Exon123385   157   IV: 5662541-5662697 Caenorhabditis elegans
Exon123386   75   IV: 5662744-5662818 Caenorhabditis elegans
Exon123388   302   IV: 5663365-5663666 Caenorhabditis elegans
Exon123389   99   IV: 5663713-5663811 Caenorhabditis elegans
Exon123390   107   IV: 5664319-5664425 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19E7.3a.1 5661141 5664425 -1

1 Sequence

Length
1335

1 Sequence Ontology Term

Identifier Name Description
transcript