WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:C31H1.6d Sequence Name  C31H1.6d
Length (nt)  1171   Chromosome Location  IV: 5800511-5805431
Chromosome . Primary Identifier  IV Chromosome Location . Start  5800511
Chromosome Location . End  5805431 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C31H1.6d

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016289 lntl-1 C31H1.6 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C31H1.6d 5800511 5805431 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon123807   102   IV: 5800511-5800612 Caenorhabditis elegans
Exon123813   487   IV: 5800898-5801384 Caenorhabditis elegans
Exon123821   327   IV: 5802001-5802327 Caenorhabditis elegans
Exon123827   87   IV: 5802632-5802718 Caenorhabditis elegans
Exon123837   117   IV: 5803956-5804072 Caenorhabditis elegans
Exon123841   51   IV: 5805381-5805431 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C31H1.6d 5800511 5805431 -1

1 Sequence

Length
1171

1 Sequence Ontology Term

Identifier Name Description
transcript