WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C31H1.8a Sequence Name  C31H1.8a
Length (nt)  1605   Chromosome Location  IV: 5811941-5812315
Chromosome . Primary Identifier  IV Chromosome Location . Start  5811941
Chromosome Location . End  5812315
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C31H1.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43675 OOPS-1, isoform a 60.8 534 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00077895
WBRNAi00085607
WBRNAi00008471
WBRNAi00041628

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C31H1.8a 5811941 5812315 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016291 oops-1 C31H1.8 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C31H1.8a 5811941 5812315 -1
CDS:C31H1.8a 5812617 5812883 -1
CDS:C31H1.8a 5812929 5813123 -1
CDS:C31H1.8a 5813179 5813462 -1
CDS:C31H1.8a 5813511 5813613 -1
CDS:C31H1.8a 5813656 5813784 -1
CDS:C31H1.8a 5813834 5814016 -1
CDS:C31H1.8a 5814066 5814134 -1

1 Sequence

Length
1605

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C31H1.8a.1 C31H1.8a.1 1971   IV: 5811583-5814142