WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C06E7.3a Sequence Name  C06E7.3a
Length (nt)  1215   Chromosome Location  IV: 5844328-5844493
Chromosome . Primary Identifier  IV Chromosome Location . Start  5844328
Chromosome Location . End  5844493
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06E7.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03959 SAMS-4, isoform a 43.9 404 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00039914
WBRNAi00024489
WBRNAi00027161
WBRNAi00010322
WBRNAi00028584
WBRNAi00071413
WBRNAi00023035
WBRNAi00023130
WBRNAi00023642
WBRNAi00023930

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C06E7.3a 5844328 5844493 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015540 sams-4 C06E7.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C06E7.3a 5844328 5844493 -1
CDS:C06E7.3a 5844537 5844946 -1
CDS:C06E7.3a 5844998 5845380 -1
CDS:C06E7.3a 5845482 5845604 -1
CDS:C06E7.3a 5845978 5846038 -1
CDS:C06E7.3a 5846264 5846335 -1

1 Sequence

Length
1215

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C06E7.3a.1 C06E7.3a.1 1516   IV: 5844061-5846369