WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:C06E7.1d Sequence Name  C06E7.1d
Length (nt)  1316   Chromosome Location  IV: 5848688-5850597
Chromosome . Primary Identifier  IV Chromosome Location . Start  5848688
Chromosome Location . End  5850597 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06E7.1d

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015538 sams-3 C06E7.1 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C06E7.1d 5848688 5850597 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124026   72   IV: 5848688-5848759 Caenorhabditis elegans
Exon124030   61   IV: 5848888-5848948 Caenorhabditis elegans
Exon124034   607   IV: 5849318-5849924 Caenorhabditis elegans
Exon124041   410   IV: 5849976-5850385 Caenorhabditis elegans
Exon124044   166   IV: 5850432-5850597 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C06E7.1d 5848688 5850597 1

1 Sequence

Length
1316

1 Sequence Ontology Term

Identifier Name Description
transcript