WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06E7.4a.1 Sequence Name  C06E7.4a.1
Length (nt)  1606   Chromosome Location  IV: 5850826-5859976
Chromosome . Primary Identifier  IV Chromosome Location . Start  5850826
Chromosome Location . End  5859976 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06E7.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015541 C06E7.4 C06E7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06E7.4a C06E7.4a 1503   IV: 5850929-5851117

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06E7.4a.1 5850826 5859976 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124046   292   IV: 5850826-5851117 Caenorhabditis elegans
Exon124048   164   IV: 5851478-5851641 Caenorhabditis elegans
Exon124050   307   IV: 5851694-5852000 Caenorhabditis elegans
Exon124052   101   IV: 5852060-5852160 Caenorhabditis elegans
Exon124055   125   IV: 5852533-5852657 Caenorhabditis elegans
Exon124058   123   IV: 5853087-5853209 Caenorhabditis elegans
Exon124073   494   IV: 5859483-5859976 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06E7.4a.1 5850826 5859976 -1

1 Sequence

Length
1606

1 Sequence Ontology Term

Identifier Name Description
transcript