WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06E7.88.1 Sequence Name  C06E7.88.1
Length (nt)  641   Chromosome Location  IV: 5865858-5867289
Chromosome . Primary Identifier  IV Chromosome Location . Start  5865858
Chromosome Location . End  5867289 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06E7.88.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00189995 C06E7.88 C06E7.88 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06E7.88 C06E7.88 504   IV: 5865986-5866109

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06E7.88.1 5865858 5867289 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124095   252   IV: 5865858-5866109 Caenorhabditis elegans
Exon124097   167   IV: 5866155-5866321 Caenorhabditis elegans
Exon124100   134   IV: 5866971-5867104 Caenorhabditis elegans
Exon124101   88   IV: 5867202-5867289 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06E7.88.1 5865858 5867289 -1

1 Sequence

Length
641

1 Sequence Ontology Term

Identifier Name Description
transcript