WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H04M03.8.1 Sequence Name  H04M03.8.1
Length (nt)  954   Chromosome Location  IV: 5876092-5877346
Chromosome . Primary Identifier  IV Chromosome Location . Start  5876092
Chromosome Location . End  5877346 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H04M03.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005732 srv-21 H04M03.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H04M03.8 H04M03.8 954   IV: 5876092-5876250

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H04M03.8.1 5876092 5877346 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124145   159   IV: 5876092-5876250 Caenorhabditis elegans
Exon124146   127   IV: 5876300-5876426 Caenorhabditis elegans
Exon124147   110   IV: 5876475-5876584 Caenorhabditis elegans
Exon124148   147   IV: 5876634-5876780 Caenorhabditis elegans
Exon124151   110   IV: 5876828-5876937 Caenorhabditis elegans
Exon124152   106   IV: 5876997-5877102 Caenorhabditis elegans
Exon124153   195   IV: 5877152-5877346 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H04M03.8.1 5876092 5877346 -1

1 Sequence

Length
954

1 Sequence Ontology Term

Identifier Name Description
transcript