WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H04M03.4.1 Sequence Name  H04M03.4.1
Length (nt)  1679   Chromosome Location  IV: 5885835-5889821
Chromosome . Primary Identifier  IV Chromosome Location . Start  5885835
Chromosome Location . End  5889821 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H04M03.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019154 glf-1 H04M03.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H04M03.4 H04M03.4 1431   IV: 5885836-5885955

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H04M03.4.1 5885835 5889821 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124194   121   IV: 5885835-5885955 Caenorhabditis elegans
Exon124198   291   IV: 5886542-5886832 Caenorhabditis elegans
Exon124199   336   IV: 5887530-5887865 Caenorhabditis elegans
Exon124200   162   IV: 5887962-5888123 Caenorhabditis elegans
Exon124203   192   IV: 5888349-5888540 Caenorhabditis elegans
Exon124205   129   IV: 5888645-5888773 Caenorhabditis elegans
Exon124212   448   IV: 5889374-5889821 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H04M03.4.1 5885835 5889821 1

1 Sequence

Length
1679

1 Sequence Ontology Term

Identifier Name Description
transcript