WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H04M03.11.1 Sequence Name  H04M03.11.1
Length (nt)  950   Chromosome Location  IV: 5882581-5884600
Chromosome . Primary Identifier  IV Chromosome Location . Start  5882581
Chromosome Location . End  5884600 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H04M03.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019155 H04M03.11 H04M03.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H04M03.11 H04M03.11 708   IV: 5882752-5882865

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H04M03.11.1 5882581 5884600 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124237   285   IV: 5882581-5882865 Caenorhabditis elegans
Exon124240   108   IV: 5882913-5883020 Caenorhabditis elegans
Exon124241   146   IV: 5883071-5883216 Caenorhabditis elegans
Exon124242   101   IV: 5883260-5883360 Caenorhabditis elegans
Exon124245   71   IV: 5883516-5883586 Caenorhabditis elegans
Exon124246   161   IV: 5883920-5884080 Caenorhabditis elegans
Exon124247   78   IV: 5884523-5884600 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H04M03.11.1 5882581 5884600 -1

1 Sequence

Length
950

1 Sequence Ontology Term

Identifier Name Description
transcript