WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02B2.1.1 Sequence Name  K02B2.1.1
Length (nt)  1551   Chromosome Location  IV: 5941926-5943998
Chromosome . Primary Identifier  IV Chromosome Location . Start  5941926
Chromosome Location . End  5943998 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02B2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019295 pfkb-1.2 K02B2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02B2.1 K02B2.1 1374   IV: 5941932-5942001

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02B2.1.1 5941926 5943998 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124404   76   IV: 5941926-5942001 Caenorhabditis elegans
Exon124405   226   IV: 5942046-5942271 Caenorhabditis elegans
Exon124407   208   IV: 5942600-5942807 Caenorhabditis elegans
Exon124408   252   IV: 5942859-5943110 Caenorhabditis elegans
Exon124409   567   IV: 5943163-5943729 Caenorhabditis elegans
Exon124410   222   IV: 5943777-5943998 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02B2.1.1 5941926 5943998 1

1 Sequence

Length
1551

1 Sequence Ontology Term

Identifier Name Description
transcript