WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0350.2c.1 Sequence Name  B0350.2c.1
Length (nt)  5844   Chromosome Location  IV: 5975557-5987485
Chromosome . Primary Identifier  IV Chromosome Location . Start  5975557
Chromosome Location . End  5987485 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0350.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006780 unc-44 B0350.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0350.2c B0350.2c 5604   IV: 5975576-5975866

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0350.2c.1 5975557 5987485 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124511   310   IV: 5975557-5975866 Caenorhabditis elegans
Exon124518   494   IV: 5976252-5976745 Caenorhabditis elegans
Exon124529   818   IV: 5977600-5978417 Caenorhabditis elegans
Exon124534   642   IV: 5978774-5979415 Caenorhabditis elegans
Exon124540   113   IV: 5979589-5979701 Caenorhabditis elegans
Exon124544   291   IV: 5979871-5980161 Caenorhabditis elegans
Exon124555   353   IV: 5981070-5981422 Caenorhabditis elegans
Exon124571   133   IV: 5982435-5982567 Caenorhabditis elegans
Exon124579   1843   IV: 5982614-5984456 Caenorhabditis elegans
Exon124589   178   IV: 5984568-5984745 Caenorhabditis elegans
Exon124597   185   IV: 5984796-5984980 Caenorhabditis elegans
Exon124604   78   IV: 5985093-5985170 Caenorhabditis elegans
Exon124615   150   IV: 5986519-5986668 Caenorhabditis elegans
Exon124625   256   IV: 5987230-5987485 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0350.2c.1 5975557 5987485 1

1 Sequence

Length
5844

1 Sequence Ontology Term

Identifier Name Description
transcript