WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0350.2h.1 Sequence Name  B0350.2h.1
Length (nt)  5648   Chromosome Location  IV: 5975571-5985376
Chromosome . Primary Identifier  IV Chromosome Location . Start  5975571
Chromosome Location . End  5985376 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0350.2h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006780 unc-44 B0350.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0350.2h B0350.2h 5448   IV: 5975576-5975866

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0350.2h.1 5975571 5985376 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124534   296   IV: 5975571-5975866 Caenorhabditis elegans
Exon124542   494   IV: 5976252-5976745 Caenorhabditis elegans
Exon124553   818   IV: 5977600-5978417 Caenorhabditis elegans
Exon124558   642   IV: 5978774-5979415 Caenorhabditis elegans
Exon124564   113   IV: 5979589-5979701 Caenorhabditis elegans
Exon124568   291   IV: 5979871-5980161 Caenorhabditis elegans
Exon124579   353   IV: 5981070-5981422 Caenorhabditis elegans
Exon124589   18   IV: 5982283-5982300 Caenorhabditis elegans
Exon124595   133   IV: 5982435-5982567 Caenorhabditis elegans
Exon124604   1843   IV: 5982614-5984456 Caenorhabditis elegans
Exon124614   178   IV: 5984568-5984745 Caenorhabditis elegans
Exon124622   185   IV: 5984796-5984980 Caenorhabditis elegans
Exon124630   284   IV: 5985093-5985376 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0350.2h.1 5975571 5985376 1

1 Sequence

Length
5648

1 Sequence Ontology Term

Identifier Name Description
transcript