WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0350.2f.1 Sequence Name  B0350.2f.1
Length (nt)  21716   Chromosome Location  IV: 5975576-6004857
Chromosome . Primary Identifier  IV Chromosome Location . Start  5975576
Chromosome Location . End  6004857 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0350.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006780 unc-44 B0350.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0350.2f B0350.2f 20985   IV: 5975576-5975866

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0350.2f.1 5975576 6004857 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124514   291   IV: 5975576-5975866 Caenorhabditis elegans
Exon124520   494   IV: 5976252-5976745 Caenorhabditis elegans
Exon124531   818   IV: 5977600-5978417 Caenorhabditis elegans
Exon124536   642   IV: 5978774-5979415 Caenorhabditis elegans
Exon124542   113   IV: 5979589-5979701 Caenorhabditis elegans
Exon124546   291   IV: 5979871-5980161 Caenorhabditis elegans
Exon124557   353   IV: 5981070-5981422 Caenorhabditis elegans
Exon124567   18   IV: 5982283-5982300 Caenorhabditis elegans
Exon124573   133   IV: 5982435-5982567 Caenorhabditis elegans
Exon124582   1843   IV: 5982614-5984456 Caenorhabditis elegans
Exon124592   178   IV: 5984568-5984745 Caenorhabditis elegans
Exon124600   185   IV: 5984796-5984980 Caenorhabditis elegans
Exon124605   78   IV: 5985093-5985170 Caenorhabditis elegans
Exon124617   150   IV: 5986519-5986668 Caenorhabditis elegans
Exon124621   27   IV: 5987230-5987256 Caenorhabditis elegans
Exon124627   14975   IV: 5988288-6003262 Caenorhabditis elegans
Exon124628   231   IV: 6003318-6003548 Caenorhabditis elegans
Exon124630   166   IV: 6003869-6004034 Caenorhabditis elegans
Exon124631   730   IV: 6004128-6004857 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0350.2f.1 5975576 6004857 1

1 Sequence

Length
21716

1 Sequence Ontology Term

Identifier Name Description
transcript