WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0350.2c.1 Sequence Name  B0350.2c.1
Length (nt)  5844   Chromosome Location  IV: 5975557-5987485
Chromosome . Primary Identifier  IV Chromosome Location . Start  5975557
Chromosome Location . End  5987485 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0350.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006780 unc-44 B0350.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0350.2c B0350.2c 5604   IV: 5975576-5975866

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0350.2c.1 5975557 5987485 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124566   310   IV: 5975557-5975866 Caenorhabditis elegans
Exon124573   494   IV: 5976252-5976745 Caenorhabditis elegans
Exon124584   818   IV: 5977600-5978417 Caenorhabditis elegans
Exon124589   642   IV: 5978774-5979415 Caenorhabditis elegans
Exon124595   113   IV: 5979589-5979701 Caenorhabditis elegans
Exon124599   291   IV: 5979871-5980161 Caenorhabditis elegans
Exon124610   353   IV: 5981070-5981422 Caenorhabditis elegans
Exon124626   133   IV: 5982435-5982567 Caenorhabditis elegans
Exon124634   1843   IV: 5982614-5984456 Caenorhabditis elegans
Exon124644   178   IV: 5984568-5984745 Caenorhabditis elegans
Exon124652   185   IV: 5984796-5984980 Caenorhabditis elegans
Exon124659   78   IV: 5985093-5985170 Caenorhabditis elegans
Exon124670   150   IV: 5986519-5986668 Caenorhabditis elegans
Exon124680   256   IV: 5987230-5987485 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0350.2c.1 5975557 5987485 1

1 Sequence

Length
5844

1 Sequence Ontology Term

Identifier Name Description
transcript