WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0350.2e.1 Sequence Name  B0350.2e.1
Length (nt)  5754   Chromosome Location  IV: 5975560-5987476
Chromosome . Primary Identifier  IV Chromosome Location . Start  5975560
Chromosome Location . End  5987476 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0350.2e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006780 unc-44 B0350.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0350.2e B0350.2e 5526   IV: 5975576-5975866

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0350.2e.1 5975560 5987476 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124567   307   IV: 5975560-5975866 Caenorhabditis elegans
Exon124574   494   IV: 5976252-5976745 Caenorhabditis elegans
Exon124585   818   IV: 5977600-5978417 Caenorhabditis elegans
Exon124590   642   IV: 5978774-5979415 Caenorhabditis elegans
Exon124596   113   IV: 5979589-5979701 Caenorhabditis elegans
Exon124600   291   IV: 5979871-5980161 Caenorhabditis elegans
Exon124611   353   IV: 5981070-5981422 Caenorhabditis elegans
Exon124627   133   IV: 5982435-5982567 Caenorhabditis elegans
Exon124636   1843   IV: 5982614-5984456 Caenorhabditis elegans
Exon124646   178   IV: 5984568-5984745 Caenorhabditis elegans
Exon124654   185   IV: 5984796-5984980 Caenorhabditis elegans
Exon124671   150   IV: 5986519-5986668 Caenorhabditis elegans
Exon124678   247   IV: 5987230-5987476 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0350.2e.1 5975560 5987476 1

1 Sequence

Length
5754

1 Sequence Ontology Term

Identifier Name Description
transcript