WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0350.2j.1 Sequence Name  B0350.2j.1
Length (nt)  2949   Chromosome Location  IV: 5980012-5985181
Chromosome . Primary Identifier  IV Chromosome Location . Start  5980012
Chromosome Location . End  5985181 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0350.2j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006780 unc-44 B0350.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0350.2j B0350.2j 2949   IV: 5980012-5980161

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0350.2j.1 5980012 5985181 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124569   150   IV: 5980012-5980161 Caenorhabditis elegans
Exon124581   353   IV: 5981070-5981422 Caenorhabditis elegans
Exon124590   18   IV: 5982283-5982300 Caenorhabditis elegans
Exon124597   133   IV: 5982435-5982567 Caenorhabditis elegans
Exon124606   1843   IV: 5982614-5984456 Caenorhabditis elegans
Exon124616   178   IV: 5984568-5984745 Caenorhabditis elegans
Exon124624   185   IV: 5984796-5984980 Caenorhabditis elegans
Exon124629   89   IV: 5985093-5985181 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0350.2j.1 5980012 5985181 1

1 Sequence

Length
2949

1 Sequence Ontology Term

Identifier Name Description
transcript