WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0350.2i.1 Sequence Name  B0350.2i.1
Length (nt)  3105   Chromosome Location  IV: 5980012-5987264
Chromosome . Primary Identifier  IV Chromosome Location . Start  5980012
Chromosome Location . End  5987264 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0350.2i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006780 unc-44 B0350.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0350.2i B0350.2i 3105   IV: 5980012-5980161

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0350.2i.1 5980012 5987264 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124570   150   IV: 5980012-5980161 Caenorhabditis elegans
Exon124580   353   IV: 5981070-5981422 Caenorhabditis elegans
Exon124596   133   IV: 5982435-5982567 Caenorhabditis elegans
Exon124605   1843   IV: 5982614-5984456 Caenorhabditis elegans
Exon124615   178   IV: 5984568-5984745 Caenorhabditis elegans
Exon124623   185   IV: 5984796-5984980 Caenorhabditis elegans
Exon124627   78   IV: 5985093-5985170 Caenorhabditis elegans
Exon124639   150   IV: 5986519-5986668 Caenorhabditis elegans
Exon124643   35   IV: 5987230-5987264 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0350.2i.1 5980012 5987264 1

1 Sequence

Length
3105

1 Sequence Ontology Term

Identifier Name Description
transcript