WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46G7.4a.1 Sequence Name  C46G7.4a.1
Length (nt)  3784   Chromosome Location  IV: 6019692-6033639
Chromosome . Primary Identifier  IV Chromosome Location . Start  6019692
Chromosome Location . End  6033639 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46G7.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004112 pqn-22 C46G7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46G7.4a C46G7.4a 3498   IV: 6019978-6020187

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46G7.4a.1 6019692 6033639 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124666   496   IV: 6019692-6020187 Caenorhabditis elegans
Exon124689   246   IV: 6020944-6021189 Caenorhabditis elegans
Exon124713   159   IV: 6021590-6021748 Caenorhabditis elegans
Exon124734   174   IV: 6021984-6022157 Caenorhabditis elegans
Exon124754   81   IV: 6022205-6022285 Caenorhabditis elegans
Exon124776   114   IV: 6022940-6023053 Caenorhabditis elegans
Exon124796   63   IV: 6023227-6023289 Caenorhabditis elegans
Exon124811   75   IV: 6023337-6023411 Caenorhabditis elegans
Exon124822   132   IV: 6023454-6023585 Caenorhabditis elegans
Exon124832   57   IV: 6023795-6023851 Caenorhabditis elegans
Exon124840   338   IV: 6024450-6024787 Caenorhabditis elegans
Exon124864   82   IV: 6026328-6026409 Caenorhabditis elegans
Exon124885   105   IV: 6026576-6026680 Caenorhabditis elegans
Exon124912   90   IV: 6027074-6027163 Caenorhabditis elegans
Exon124928   111   IV: 6027414-6027524 Caenorhabditis elegans
Exon124950   138   IV: 6028971-6029108 Caenorhabditis elegans
Exon124958   282   IV: 6029157-6029438 Caenorhabditis elegans
Exon124976   621   IV: 6030081-6030701 Caenorhabditis elegans
Exon124993   112   IV: 6030974-6031085 Caenorhabditis elegans
Exon125019   125   IV: 6031495-6031619 Caenorhabditis elegans
Exon125035   183   IV: 6033457-6033639 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46G7.4a.1 6019692 6033639 -1

1 Sequence

Length
3784

1 Sequence Ontology Term

Identifier Name Description
transcript