WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46G7.4i.1 Sequence Name  C46G7.4i.1
Length (nt)  3255   Chromosome Location  IV: 6019702-6031547
Chromosome . Primary Identifier  IV Chromosome Location . Start  6019702
Chromosome Location . End  6031547 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46G7.4i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004112 pqn-22 C46G7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46G7.4i C46G7.4i 2979   IV: 6019978-6020187

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C46G7.4i.1 6019702 6031547 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124667   486   IV: 6019702-6020187 Caenorhabditis elegans
Exon124697   246   IV: 6020944-6021189 Caenorhabditis elegans
Exon124721   159   IV: 6021590-6021748 Caenorhabditis elegans
Exon124742   174   IV: 6021984-6022157 Caenorhabditis elegans
Exon124762   81   IV: 6022205-6022285 Caenorhabditis elegans
Exon124784   114   IV: 6022940-6023053 Caenorhabditis elegans
Exon124802   63   IV: 6023227-6023289 Caenorhabditis elegans
Exon124848   338   IV: 6024450-6024787 Caenorhabditis elegans
Exon124872   82   IV: 6026328-6026409 Caenorhabditis elegans
Exon124893   105   IV: 6026576-6026680 Caenorhabditis elegans
Exon124916   90   IV: 6027074-6027163 Caenorhabditis elegans
Exon124932   111   IV: 6027414-6027524 Caenorhabditis elegans
Exon124953   138   IV: 6028971-6029108 Caenorhabditis elegans
Exon124962   282   IV: 6029157-6029438 Caenorhabditis elegans
Exon124980   621   IV: 6030081-6030701 Caenorhabditis elegans
Exon124997   112   IV: 6030974-6031085 Caenorhabditis elegans
Exon125014   53   IV: 6031495-6031547 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C46G7.4i.1 6019702 6031547 -1

1 Sequence

Length
3255

1 Sequence Ontology Term

Identifier Name Description
transcript