WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46G7.4e.1 Sequence Name  C46G7.4e.1
Length (nt)  1858   Chromosome Location  IV: 6019704-6027085
Chromosome . Primary Identifier  IV Chromosome Location . Start  6019704
Chromosome Location . End  6027085 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46G7.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004112 pqn-22 C46G7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46G7.4e C46G7.4e 1584   IV: 6019978-6020187

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46G7.4e.1 6019704 6027085 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124669   484   IV: 6019704-6020187 Caenorhabditis elegans
Exon124693   246   IV: 6020944-6021189 Caenorhabditis elegans
Exon124717   159   IV: 6021590-6021748 Caenorhabditis elegans
Exon124738   174   IV: 6021984-6022157 Caenorhabditis elegans
Exon124758   81   IV: 6022205-6022285 Caenorhabditis elegans
Exon124780   114   IV: 6022940-6023053 Caenorhabditis elegans
Exon124799   63   IV: 6023227-6023289 Caenorhabditis elegans
Exon124844   338   IV: 6024450-6024787 Caenorhabditis elegans
Exon124868   82   IV: 6026328-6026409 Caenorhabditis elegans
Exon124889   105   IV: 6026576-6026680 Caenorhabditis elegans
Exon124910   12   IV: 6027074-6027085 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46G7.4e.1 6019704 6027085 -1

1 Sequence

Length
1858

1 Sequence Ontology Term

Identifier Name Description
transcript