WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46G7.4f.1 Sequence Name  C46G7.4f.1
Length (nt)  1521   Chromosome Location  IV: 6019978-6027085
Chromosome . Primary Identifier  IV Chromosome Location . Start  6019978
Chromosome Location . End  6027085 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46G7.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004112 pqn-22 C46G7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46G7.4f C46G7.4f 1521   IV: 6019978-6020187

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46G7.4f.1 6019978 6027085 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124678   210   IV: 6019978-6020187 Caenorhabditis elegans
Exon124694   246   IV: 6020944-6021189 Caenorhabditis elegans
Exon124718   159   IV: 6021590-6021748 Caenorhabditis elegans
Exon124739   174   IV: 6021984-6022157 Caenorhabditis elegans
Exon124759   81   IV: 6022205-6022285 Caenorhabditis elegans
Exon124781   114   IV: 6022940-6023053 Caenorhabditis elegans
Exon124845   338   IV: 6024450-6024787 Caenorhabditis elegans
Exon124869   82   IV: 6026328-6026409 Caenorhabditis elegans
Exon124890   105   IV: 6026576-6026680 Caenorhabditis elegans
Exon124911   12   IV: 6027074-6027085 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46G7.4f.1 6019978 6027085 -1

1 Sequence

Length
1521

1 Sequence Ontology Term

Identifier Name Description
transcript