WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H16O14.1b.1 Sequence Name  H16O14.1b.1
Length (nt)  3885   Chromosome Location  IV: 6053695-6074506
Chromosome . Primary Identifier  IV Chromosome Location . Start  6053695
Chromosome Location . End  6074506 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H16O14.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019205 kcc-2 H16O14.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H16O14.1b H16O14.1b 3240   IV: 6053799-6053925

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H16O14.1b.1 6053695 6074506 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon125105   231   IV: 6053695-6053925 Caenorhabditis elegans
Exon125131   59   IV: 6062095-6062153 Caenorhabditis elegans
Exon125143   108   IV: 6064344-6064451 Caenorhabditis elegans
Exon125151   150   IV: 6065506-6065655 Caenorhabditis elegans
Exon125166   540   IV: 6066965-6067504 Caenorhabditis elegans
Exon125172   349   IV: 6068288-6068636 Caenorhabditis elegans
Exon125177   352   IV: 6068748-6069099 Caenorhabditis elegans
Exon125190   583   IV: 6070333-6070915 Caenorhabditis elegans
Exon125196   206   IV: 6071520-6071725 Caenorhabditis elegans
Exon125203   193   IV: 6072181-6072373 Caenorhabditis elegans
Exon125209   165   IV: 6072522-6072686 Caenorhabditis elegans
Exon125214   132   IV: 6072766-6072897 Caenorhabditis elegans
Exon125220   184   IV: 6073565-6073748 Caenorhabditis elegans
Exon125227   633   IV: 6073874-6074506 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H16O14.1b.1 6053695 6074506 1

1 Sequence

Length
3885

1 Sequence Ontology Term

Identifier Name Description
transcript