WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08B4.3.1 Sequence Name  K08B4.3.1
Length (nt)  1691   Chromosome Location  IV: 6076686-6079952
Chromosome . Primary Identifier  IV Chromosome Location . Start  6076686
Chromosome Location . End  6079952 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08B4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019515 ugt-19 K08B4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08B4.3 K08B4.3 1599   IV: 6076771-6076963

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08B4.3.1 6076686 6079952 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon125243   278   IV: 6076686-6076963 Caenorhabditis elegans
Exon125244   233   IV: 6077013-6077245 Caenorhabditis elegans
Exon125245   223   IV: 6077302-6077524 Caenorhabditis elegans
Exon125249   493   IV: 6077841-6078333 Caenorhabditis elegans
Exon125252   133   IV: 6078668-6078800 Caenorhabditis elegans
Exon125253   171   IV: 6078850-6079020 Caenorhabditis elegans
Exon125256   160   IV: 6079793-6079952 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08B4.3.1 6076686 6079952 -1

1 Sequence

Length
1691

1 Sequence Ontology Term

Identifier Name Description
transcript