WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08B4.2.1 Sequence Name  K08B4.2.1
Length (nt)  922   Chromosome Location  IV: 6074972-6076228
Chromosome . Primary Identifier  IV Chromosome Location . Start  6074972
Chromosome Location . End  6076228 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08B4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019514 cpg-20 K08B4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08B4.2 K08B4.2 522   IV: 6075301-6075433

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08B4.2.1 6074972 6076228 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon125286   462   IV: 6074972-6075433 Caenorhabditis elegans
Exon125288   103   IV: 6075480-6075582 Caenorhabditis elegans
Exon125292   237   IV: 6075825-6076061 Caenorhabditis elegans
Exon125295   120   IV: 6076109-6076228 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08B4.2.1 6074972 6076228 -1

1 Sequence

Length
922

1 Sequence Ontology Term

Identifier Name Description
transcript