WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08B4.1a.1 Sequence Name  K08B4.1a.1
Length (nt)  2572   Chromosome Location  IV: 6095407-6110655
Chromosome . Primary Identifier  IV Chromosome Location . Start  6095407
Chromosome Location . End  6110655 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08B4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002245 lag-1 K08B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08B4.1a K08B4.1a 2022   IV: 6095416-6095504

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08B4.1a.1 6095407 6110655 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon125295   98   IV: 6095407-6095504 Caenorhabditis elegans
Exon125297   38   IV: 6101422-6101459 Caenorhabditis elegans
Exon125299   80   IV: 6101508-6101587 Caenorhabditis elegans
Exon125303   66   IV: 6102717-6102782 Caenorhabditis elegans
Exon125307   139   IV: 6102838-6102976 Caenorhabditis elegans
Exon125314   187   IV: 6106168-6106354 Caenorhabditis elegans
Exon125318   102   IV: 6106406-6106507 Caenorhabditis elegans
Exon125322   265   IV: 6107718-6107982 Caenorhabditis elegans
Exon125326   322   IV: 6108040-6108361 Caenorhabditis elegans
Exon125330   131   IV: 6108416-6108546 Caenorhabditis elegans
Exon125334   492   IV: 6108985-6109476 Caenorhabditis elegans
Exon125341   652   IV: 6110004-6110655 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08B4.1a.1 6095407 6110655 1

1 Sequence

Length
2572

1 Sequence Ontology Term

Identifier Name Description
transcript