WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08B4.1c.1 Sequence Name  K08B4.1c.1
Length (nt)  1884   Chromosome Location  IV: 6101519-6110114
Chromosome . Primary Identifier  IV Chromosome Location . Start  6101519
Chromosome Location . End  6110114 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08B4.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002245 lag-1 K08B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08B4.1c K08B4.1c 1884   IV: 6101519-6101587

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08B4.1c.1 6101519 6110114 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon125302   69   IV: 6101519-6101587 Caenorhabditis elegans
Exon125305   66   IV: 6102717-6102782 Caenorhabditis elegans
Exon125309   139   IV: 6102838-6102976 Caenorhabditis elegans
Exon125316   187   IV: 6106168-6106354 Caenorhabditis elegans
Exon125320   102   IV: 6106406-6106507 Caenorhabditis elegans
Exon125324   265   IV: 6107718-6107982 Caenorhabditis elegans
Exon125328   322   IV: 6108040-6108361 Caenorhabditis elegans
Exon125332   131   IV: 6108416-6108546 Caenorhabditis elegans
Exon125336   492   IV: 6108985-6109476 Caenorhabditis elegans
Exon125338   111   IV: 6110004-6110114 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08B4.1c.1 6101519 6110114 1

1 Sequence

Length
1884

1 Sequence Ontology Term

Identifier Name Description
transcript