WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08B4.1d.1 Sequence Name  K08B4.1d.1
Length (nt)  4541   Chromosome Location  IV: 6101512-6110641
Chromosome . Primary Identifier  IV Chromosome Location . Start  6101512
Chromosome Location . End  6110641 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08B4.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002245 lag-1 K08B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08B4.1d K08B4.1d 2373   IV: 6104337-6105099

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08B4.1d.1 6101512 6110641 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon125321   76   IV: 6101512-6101587 Caenorhabditis elegans
Exon125327   66   IV: 6102717-6102782 Caenorhabditis elegans
Exon125331   2262   IV: 6102838-6105099 Caenorhabditis elegans
Exon125338   187   IV: 6106168-6106354 Caenorhabditis elegans
Exon125342   102   IV: 6106406-6106507 Caenorhabditis elegans
Exon125346   265   IV: 6107718-6107982 Caenorhabditis elegans
Exon125350   322   IV: 6108040-6108361 Caenorhabditis elegans
Exon125354   131   IV: 6108416-6108546 Caenorhabditis elegans
Exon125358   492   IV: 6108985-6109476 Caenorhabditis elegans
Exon125361   638   IV: 6110004-6110641 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08B4.1d.1 6101512 6110641 1

1 Sequence

Length
4541

1 Sequence Ontology Term

Identifier Name Description
transcript