WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M03D4.1d.1 Sequence Name  M03D4.1d.1
Length (nt)  2882   Chromosome Location  IV: 6118215-6121777
Chromosome . Primary Identifier  IV Chromosome Location . Start  6118215
Chromosome Location . End  6121777 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M03D4.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006974 zen-4 M03D4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M03D4.1d M03D4.1d 2364   IV: 6118224-6118666

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M03D4.1d.1 6118215 6121777 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon125362   452   IV: 6118215-6118666 Caenorhabditis elegans
Exon125373   249   IV: 6118713-6118961 Caenorhabditis elegans
Exon125379   306   IV: 6119004-6119309 Caenorhabditis elegans
Exon125391   250   IV: 6119364-6119613 Caenorhabditis elegans
Exon125400   183   IV: 6119666-6119848 Caenorhabditis elegans
Exon125409   723   IV: 6119894-6120616 Caenorhabditis elegans
Exon125416   87   IV: 6120673-6120759 Caenorhabditis elegans
Exon125423   198   IV: 6120900-6121097 Caenorhabditis elegans
Exon125431   434   IV: 6121344-6121777 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M03D4.1d.1 6118215 6121777 1

1 Sequence

Length
2882

1 Sequence Ontology Term

Identifier Name Description
transcript