WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11D2.6g.1 Sequence Name  C11D2.6g.1
Length (nt)  5499   Chromosome Location  IV: 6157443-6172937
Chromosome . Primary Identifier  IV Chromosome Location . Start  6157443
Chromosome Location . End  6172937 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11D2.6g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006809 unc-77 C11D2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11D2.6g C11D2.6g 5499   IV: 6157443-6157553

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C11D2.6g.1 6157443 6172937 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon125546   111   IV: 6157443-6157553 Caenorhabditis elegans
Exon125561   108   IV: 6157602-6157709 Caenorhabditis elegans
Exon125585   72   IV: 6158321-6158392 Caenorhabditis elegans
Exon125601   394   IV: 6158469-6158862 Caenorhabditis elegans
Exon125619   274   IV: 6159867-6160140 Caenorhabditis elegans
Exon125637   136   IV: 6160313-6160448 Caenorhabditis elegans
Exon125655   94   IV: 6161018-6161111 Caenorhabditis elegans
Exon125671   157   IV: 6161161-6161317 Caenorhabditis elegans
Exon125691   844   IV: 6162027-6162870 Caenorhabditis elegans
Exon125710   178   IV: 6163505-6163682 Caenorhabditis elegans
Exon125726   95   IV: 6163784-6163878 Caenorhabditis elegans
Exon125742   132   IV: 6163927-6164058 Caenorhabditis elegans
Exon125761   316   IV: 6164487-6164802 Caenorhabditis elegans
Exon125778   183   IV: 6165395-6165577 Caenorhabditis elegans
Exon125794   102   IV: 6165946-6166047 Caenorhabditis elegans
Exon125807   121   IV: 6166244-6166364 Caenorhabditis elegans
Exon125824   98   IV: 6166573-6166670 Caenorhabditis elegans
Exon125841   179   IV: 6166749-6166927 Caenorhabditis elegans
Exon125858   138   IV: 6167122-6167259 Caenorhabditis elegans
Exon125875   495   IV: 6167779-6168273 Caenorhabditis elegans
Exon125895   497   IV: 6168521-6169017 Caenorhabditis elegans
Exon125912   116   IV: 6169701-6169816 Caenorhabditis elegans
Exon125928   142   IV: 6169899-6170040 Caenorhabditis elegans
Exon125944   100   IV: 6170087-6170186 Caenorhabditis elegans
Exon125964   135   IV: 6170468-6170602 Caenorhabditis elegans
Exon125981   65   IV: 6170740-6170804 Caenorhabditis elegans
Exon125998   156   IV: 6171251-6171406 Caenorhabditis elegans
Exon126016   61   IV: 6172877-6172937 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C11D2.6g.1 6157443 6172937 -1

1 Sequence

Length
5499

1 Sequence Ontology Term

Identifier Name Description
transcript