WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11D2.6b.1 Sequence Name  C11D2.6b.1
Length (nt)  5304   Chromosome Location  IV: 6157443-6171287
Chromosome . Primary Identifier  IV Chromosome Location . Start  6157443
Chromosome Location . End  6171287 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11D2.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006809 unc-77 C11D2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11D2.6b C11D2.6b 5304   IV: 6157443-6157553

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C11D2.6b.1 6157443 6171287 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon125597   111   IV: 6157443-6157553 Caenorhabditis elegans
Exon125611   108   IV: 6157602-6157709 Caenorhabditis elegans
Exon125627   87   IV: 6157828-6157914 Caenorhabditis elegans
Exon125635   72   IV: 6158321-6158392 Caenorhabditis elegans
Exon125651   394   IV: 6158469-6158862 Caenorhabditis elegans
Exon125669   274   IV: 6159867-6160140 Caenorhabditis elegans
Exon125687   136   IV: 6160313-6160448 Caenorhabditis elegans
Exon125705   94   IV: 6161018-6161111 Caenorhabditis elegans
Exon125721   157   IV: 6161161-6161317 Caenorhabditis elegans
Exon125741   844   IV: 6162027-6162870 Caenorhabditis elegans
Exon125760   178   IV: 6163505-6163682 Caenorhabditis elegans
Exon125776   95   IV: 6163784-6163878 Caenorhabditis elegans
Exon125792   132   IV: 6163927-6164058 Caenorhabditis elegans
Exon125811   316   IV: 6164487-6164802 Caenorhabditis elegans
Exon125828   183   IV: 6165395-6165577 Caenorhabditis elegans
Exon125857   121   IV: 6166244-6166364 Caenorhabditis elegans
Exon125874   98   IV: 6166573-6166670 Caenorhabditis elegans
Exon125891   179   IV: 6166749-6166927 Caenorhabditis elegans
Exon125908   138   IV: 6167122-6167259 Caenorhabditis elegans
Exon125925   495   IV: 6167779-6168273 Caenorhabditis elegans
Exon125945   497   IV: 6168521-6169017 Caenorhabditis elegans
Exon125962   116   IV: 6169701-6169816 Caenorhabditis elegans
Exon125978   142   IV: 6169899-6170040 Caenorhabditis elegans
Exon125994   100   IV: 6170087-6170186 Caenorhabditis elegans
Exon126014   135   IV: 6170468-6170602 Caenorhabditis elegans
Exon126031   65   IV: 6170740-6170804 Caenorhabditis elegans
Exon126046   37   IV: 6171251-6171287 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C11D2.6b.1 6157443 6171287 -1

1 Sequence

Length
5304

1 Sequence Ontology Term

Identifier Name Description
transcript