WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11D2.6i.1 Sequence Name  C11D2.6i.1
Length (nt)  5550   Chromosome Location  IV: 6157443-6179231
Chromosome . Primary Identifier  IV Chromosome Location . Start  6157443
Chromosome Location . End  6179231 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11D2.6i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006809 unc-77 C11D2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11D2.6i C11D2.6i 5550   IV: 6157443-6157553

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C11D2.6i.1 6157443 6179231 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon125547   111   IV: 6157443-6157553 Caenorhabditis elegans
Exon125563   108   IV: 6157602-6157709 Caenorhabditis elegans
Exon125575   87   IV: 6157828-6157914 Caenorhabditis elegans
Exon125587   72   IV: 6158321-6158392 Caenorhabditis elegans
Exon125603   394   IV: 6158469-6158862 Caenorhabditis elegans
Exon125621   274   IV: 6159867-6160140 Caenorhabditis elegans
Exon125639   136   IV: 6160313-6160448 Caenorhabditis elegans
Exon125657   94   IV: 6161018-6161111 Caenorhabditis elegans
Exon125673   157   IV: 6161161-6161317 Caenorhabditis elegans
Exon125693   844   IV: 6162027-6162870 Caenorhabditis elegans
Exon125712   178   IV: 6163505-6163682 Caenorhabditis elegans
Exon125728   95   IV: 6163784-6163878 Caenorhabditis elegans
Exon125744   132   IV: 6163927-6164058 Caenorhabditis elegans
Exon125763   316   IV: 6164487-6164802 Caenorhabditis elegans
Exon125780   183   IV: 6165395-6165577 Caenorhabditis elegans
Exon125796   102   IV: 6165946-6166047 Caenorhabditis elegans
Exon125809   121   IV: 6166244-6166364 Caenorhabditis elegans
Exon125826   98   IV: 6166573-6166670 Caenorhabditis elegans
Exon125843   179   IV: 6166749-6166927 Caenorhabditis elegans
Exon125860   138   IV: 6167122-6167259 Caenorhabditis elegans
Exon125877   495   IV: 6167779-6168273 Caenorhabditis elegans
Exon125897   497   IV: 6168521-6169017 Caenorhabditis elegans
Exon125914   116   IV: 6169701-6169816 Caenorhabditis elegans
Exon125930   142   IV: 6169899-6170040 Caenorhabditis elegans
Exon125946   100   IV: 6170087-6170186 Caenorhabditis elegans
Exon125966   135   IV: 6170468-6170602 Caenorhabditis elegans
Exon125983   65   IV: 6170740-6170804 Caenorhabditis elegans
Exon125999   156   IV: 6171251-6171406 Caenorhabditis elegans
Exon126031   25   IV: 6179207-6179231 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C11D2.6i.1 6157443 6179231 -1

1 Sequence

Length
5550

1 Sequence Ontology Term

Identifier Name Description
transcript