WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11D2.6i.1 Sequence Name  C11D2.6i.1
Length (nt)  5550   Chromosome Location  IV: 6157443-6179231
Chromosome . Primary Identifier  IV Chromosome Location . Start  6157443
Chromosome Location . End  6179231 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11D2.6i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006809 unc-77 C11D2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11D2.6i C11D2.6i 5550   IV: 6157443-6157553

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C11D2.6i.1 6157443 6179231 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon125602   111   IV: 6157443-6157553 Caenorhabditis elegans
Exon125618   108   IV: 6157602-6157709 Caenorhabditis elegans
Exon125630   87   IV: 6157828-6157914 Caenorhabditis elegans
Exon125642   72   IV: 6158321-6158392 Caenorhabditis elegans
Exon125658   394   IV: 6158469-6158862 Caenorhabditis elegans
Exon125676   274   IV: 6159867-6160140 Caenorhabditis elegans
Exon125694   136   IV: 6160313-6160448 Caenorhabditis elegans
Exon125712   94   IV: 6161018-6161111 Caenorhabditis elegans
Exon125728   157   IV: 6161161-6161317 Caenorhabditis elegans
Exon125748   844   IV: 6162027-6162870 Caenorhabditis elegans
Exon125767   178   IV: 6163505-6163682 Caenorhabditis elegans
Exon125783   95   IV: 6163784-6163878 Caenorhabditis elegans
Exon125799   132   IV: 6163927-6164058 Caenorhabditis elegans
Exon125818   316   IV: 6164487-6164802 Caenorhabditis elegans
Exon125835   183   IV: 6165395-6165577 Caenorhabditis elegans
Exon125851   102   IV: 6165946-6166047 Caenorhabditis elegans
Exon125864   121   IV: 6166244-6166364 Caenorhabditis elegans
Exon125881   98   IV: 6166573-6166670 Caenorhabditis elegans
Exon125898   179   IV: 6166749-6166927 Caenorhabditis elegans
Exon125915   138   IV: 6167122-6167259 Caenorhabditis elegans
Exon125932   495   IV: 6167779-6168273 Caenorhabditis elegans
Exon125952   497   IV: 6168521-6169017 Caenorhabditis elegans
Exon125969   116   IV: 6169701-6169816 Caenorhabditis elegans
Exon125985   142   IV: 6169899-6170040 Caenorhabditis elegans
Exon126001   100   IV: 6170087-6170186 Caenorhabditis elegans
Exon126021   135   IV: 6170468-6170602 Caenorhabditis elegans
Exon126038   65   IV: 6170740-6170804 Caenorhabditis elegans
Exon126054   156   IV: 6171251-6171406 Caenorhabditis elegans
Exon126086   25   IV: 6179207-6179231 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C11D2.6i.1 6157443 6179231 -1

1 Sequence

Length
5550

1 Sequence Ontology Term

Identifier Name Description
transcript