WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11D2.6o.1 Sequence Name  C11D2.6o.1
Length (nt)  5502   Chromosome Location  IV: 6157443-6183857
Chromosome . Primary Identifier  IV Chromosome Location . Start  6157443
Chromosome Location . End  6183857 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11D2.6o.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006809 unc-77 C11D2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11D2.6o C11D2.6o 5502   IV: 6157443-6157553

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C11D2.6o.1 6157443 6183857 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon125553   111   IV: 6157443-6157553 Caenorhabditis elegans
Exon125569   108   IV: 6157602-6157709 Caenorhabditis elegans
Exon125578   87   IV: 6157828-6157914 Caenorhabditis elegans
Exon125593   72   IV: 6158321-6158392 Caenorhabditis elegans
Exon125609   394   IV: 6158469-6158862 Caenorhabditis elegans
Exon125627   274   IV: 6159867-6160140 Caenorhabditis elegans
Exon125645   136   IV: 6160313-6160448 Caenorhabditis elegans
Exon125663   94   IV: 6161018-6161111 Caenorhabditis elegans
Exon125679   157   IV: 6161161-6161317 Caenorhabditis elegans
Exon125699   844   IV: 6162027-6162870 Caenorhabditis elegans
Exon125718   178   IV: 6163505-6163682 Caenorhabditis elegans
Exon125734   95   IV: 6163784-6163878 Caenorhabditis elegans
Exon125750   132   IV: 6163927-6164058 Caenorhabditis elegans
Exon125769   316   IV: 6164487-6164802 Caenorhabditis elegans
Exon125786   183   IV: 6165395-6165577 Caenorhabditis elegans
Exon125815   121   IV: 6166244-6166364 Caenorhabditis elegans
Exon125832   98   IV: 6166573-6166670 Caenorhabditis elegans
Exon125849   179   IV: 6166749-6166927 Caenorhabditis elegans
Exon125866   138   IV: 6167122-6167259 Caenorhabditis elegans
Exon125883   495   IV: 6167779-6168273 Caenorhabditis elegans
Exon125903   497   IV: 6168521-6169017 Caenorhabditis elegans
Exon125920   116   IV: 6169701-6169816 Caenorhabditis elegans
Exon125936   142   IV: 6169899-6170040 Caenorhabditis elegans
Exon125952   100   IV: 6170087-6170186 Caenorhabditis elegans
Exon125972   135   IV: 6170468-6170602 Caenorhabditis elegans
Exon125989   65   IV: 6170740-6170804 Caenorhabditis elegans
Exon126005   156   IV: 6171251-6171406 Caenorhabditis elegans
Exon126037   46   IV: 6179207-6179252 Caenorhabditis elegans
Exon126055   33   IV: 6183825-6183857 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C11D2.6o.1 6157443 6183857 -1

1 Sequence

Length
5502

1 Sequence Ontology Term

Identifier Name Description
transcript