WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11D2.6o.1 Sequence Name  C11D2.6o.1
Length (nt)  5502   Chromosome Location  IV: 6157443-6183857
Chromosome . Primary Identifier  IV Chromosome Location . Start  6157443
Chromosome Location . End  6183857 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11D2.6o.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006809 unc-77 C11D2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11D2.6o C11D2.6o 5502   IV: 6157443-6157553

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C11D2.6o.1 6157443 6183857 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon125608   111   IV: 6157443-6157553 Caenorhabditis elegans
Exon125624   108   IV: 6157602-6157709 Caenorhabditis elegans
Exon125633   87   IV: 6157828-6157914 Caenorhabditis elegans
Exon125648   72   IV: 6158321-6158392 Caenorhabditis elegans
Exon125664   394   IV: 6158469-6158862 Caenorhabditis elegans
Exon125682   274   IV: 6159867-6160140 Caenorhabditis elegans
Exon125700   136   IV: 6160313-6160448 Caenorhabditis elegans
Exon125718   94   IV: 6161018-6161111 Caenorhabditis elegans
Exon125734   157   IV: 6161161-6161317 Caenorhabditis elegans
Exon125754   844   IV: 6162027-6162870 Caenorhabditis elegans
Exon125773   178   IV: 6163505-6163682 Caenorhabditis elegans
Exon125789   95   IV: 6163784-6163878 Caenorhabditis elegans
Exon125805   132   IV: 6163927-6164058 Caenorhabditis elegans
Exon125824   316   IV: 6164487-6164802 Caenorhabditis elegans
Exon125841   183   IV: 6165395-6165577 Caenorhabditis elegans
Exon125870   121   IV: 6166244-6166364 Caenorhabditis elegans
Exon125887   98   IV: 6166573-6166670 Caenorhabditis elegans
Exon125904   179   IV: 6166749-6166927 Caenorhabditis elegans
Exon125921   138   IV: 6167122-6167259 Caenorhabditis elegans
Exon125938   495   IV: 6167779-6168273 Caenorhabditis elegans
Exon125958   497   IV: 6168521-6169017 Caenorhabditis elegans
Exon125975   116   IV: 6169701-6169816 Caenorhabditis elegans
Exon125991   142   IV: 6169899-6170040 Caenorhabditis elegans
Exon126007   100   IV: 6170087-6170186 Caenorhabditis elegans
Exon126027   135   IV: 6170468-6170602 Caenorhabditis elegans
Exon126044   65   IV: 6170740-6170804 Caenorhabditis elegans
Exon126060   156   IV: 6171251-6171406 Caenorhabditis elegans
Exon126092   46   IV: 6179207-6179252 Caenorhabditis elegans
Exon126110   33   IV: 6183825-6183857 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C11D2.6o.1 6157443 6183857 -1

1 Sequence

Length
5502

1 Sequence Ontology Term

Identifier Name Description
transcript