WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49A9.2.1 Sequence Name  C49A9.2.1
Length (nt)  1808   Chromosome Location  IV: 6225443-6227995
Chromosome . Primary Identifier  IV Chromosome Location . Start  6225443
Chromosome Location . End  6227995 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49A9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016756 C49A9.2 C49A9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49A9.2 C49A9.2 1719   IV: 6225451-6225533

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49A9.2.1 6225443 6227995 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126201   91   IV: 6225443-6225533 Caenorhabditis elegans
Exon126202   166   IV: 6225653-6225818 Caenorhabditis elegans
Exon126203   131   IV: 6225869-6225999 Caenorhabditis elegans
Exon126204   178   IV: 6226046-6226223 Caenorhabditis elegans
Exon126205   135   IV: 6226268-6226402 Caenorhabditis elegans
Exon126206   150   IV: 6226444-6226593 Caenorhabditis elegans
Exon126208   120   IV: 6226644-6226763 Caenorhabditis elegans
Exon126209   125   IV: 6226992-6227116 Caenorhabditis elegans
Exon126210   258   IV: 6227177-6227434 Caenorhabditis elegans
Exon126212   244   IV: 6227480-6227723 Caenorhabditis elegans
Exon126213   210   IV: 6227786-6227995 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49A9.2.1 6225443 6227995 1

1 Sequence

Length
1808

1 Sequence Ontology Term

Identifier Name Description
transcript