WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13A10.5b.1 Sequence Name  T13A10.5b.1
Length (nt)  1275   Chromosome Location  IV: 6255049-6259832
Chromosome . Primary Identifier  IV Chromosome Location . Start  6255049
Chromosome Location . End  6259832 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13A10.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003754 nlp-16 T13A10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13A10.5b T13A10.5b 846   IV: 6255464-6255475

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13A10.5b.1 6255049 6259832 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126298   427   IV: 6255049-6255475 Caenorhabditis elegans
Exon126303   176   IV: 6256275-6256450 Caenorhabditis elegans
Exon126307   508   IV: 6258896-6259403 Caenorhabditis elegans
Exon126309   164   IV: 6259669-6259832 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13A10.5b.1 6255049 6259832 -1

1 Sequence

Length
1275

1 Sequence Ontology Term

Identifier Name Description
transcript