WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T13A10.5a Sequence Name  T13A10.5a
Length (nt)  981   Chromosome Location  IV: 6255333-6255475
Chromosome . Primary Identifier  IV Chromosome Location . Start  6255333
Chromosome Location . End  6255475
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13A10.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31727 NLP-16, isoform a 37.1 326 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00053238
WBRNAi00053239
WBRNAi00018654
WBRNAi00018655
WBRNAi00035528
WBRNAi00082025
WBRNAi00082028

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T13A10.5a 6255333 6255475 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003754 nlp-16 T13A10.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T13A10.5a 6255333 6255475 -1
CDS:T13A10.5a 6256271 6256450 -1
CDS:T13A10.5a 6258896 6259403 -1
CDS:T13A10.5a 6259669 6259818 -1

1 Sequence

Length
981

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T13A10.5a.1 T13A10.5a.1 1246   IV: 6255071-6259821