WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:T13A10.11b Sequence Name  T13A10.11b
Length (nt)  1361   Chromosome Location  IV: 6277481-6279142
Chromosome . Primary Identifier  IV Chromosome Location . Start  6277481
Chromosome Location . End  6279142 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13A10.11b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006416 sams-5 T13A10.11 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T13A10.11b 6277481 6279142 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126451   166   IV: 6277481-6277646 Caenorhabditis elegans
Exon126454   410   IV: 6277692-6278101 Caenorhabditis elegans
Exon126457   383   IV: 6278149-6278531 Caenorhabditis elegans
Exon126460   202   IV: 6278577-6278778 Caenorhabditis elegans
Exon126461   128   IV: 6278825-6278952 Caenorhabditis elegans
Exon126464   72   IV: 6279071-6279142 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T13A10.11b 6277481 6279142 -1

1 Sequence

Length
1361

1 Sequence Ontology Term

Identifier Name Description
transcript