WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13A10.12.1 Sequence Name  T13A10.12.1
Length (nt)  1216   Chromosome Location  IV: 6279960-6282243
Chromosome . Primary Identifier  IV Chromosome Location . Start  6279960
Chromosome Location . End  6282243 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13A10.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005743 srv-32 T13A10.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13A10.12 T13A10.12 1029   IV: 6280147-6280278

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13A10.12.1 6279960 6282243 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126469   319   IV: 6279960-6280278 Caenorhabditis elegans
Exon126470   144   IV: 6280323-6280466 Caenorhabditis elegans
Exon126471   112   IV: 6280513-6280624 Caenorhabditis elegans
Exon126472   110   IV: 6280838-6280947 Caenorhabditis elegans
Exon126475   147   IV: 6281119-6281265 Caenorhabditis elegans
Exon126476   110   IV: 6281311-6281420 Caenorhabditis elegans
Exon126477   112   IV: 6281469-6281580 Caenorhabditis elegans
Exon126479   162   IV: 6282082-6282243 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13A10.12.1 6279960 6282243 -1

1 Sequence

Length
1216

1 Sequence Ontology Term

Identifier Name Description
transcript