WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73B6BL.7a.1 Sequence Name  Y73B6BL.7a.1
Length (nt)  2724   Chromosome Location  IV: 6307739-6315719
Chromosome . Primary Identifier  IV Chromosome Location . Start  6307739
Chromosome Location . End  6315719 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6BL.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000820 csp-2 Y73B6BL.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B6BL.7a Y73B6BL.7a 2481   IV: 6307739-6307796

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.7a.1 6307739 6315719 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126497   58   IV: 6307739-6307796 Caenorhabditis elegans
Exon126499   45   IV: 6307845-6307889 Caenorhabditis elegans
Exon126500   146   IV: 6309156-6309301 Caenorhabditis elegans
Exon126501   150   IV: 6309649-6309798 Caenorhabditis elegans
Exon126503   188   IV: 6309900-6310087 Caenorhabditis elegans
Exon126505   698   IV: 6310615-6311312 Caenorhabditis elegans
Exon126507   78   IV: 6311451-6311528 Caenorhabditis elegans
Exon126509   69   IV: 6311582-6311650 Caenorhabditis elegans
Exon126511   111   IV: 6311966-6312076 Caenorhabditis elegans
Exon126513   111   IV: 6312338-6312448 Caenorhabditis elegans
Exon126515   251   IV: 6314423-6314673 Caenorhabditis elegans
Exon126518   202   IV: 6314719-6314920 Caenorhabditis elegans
Exon126521   95   IV: 6314968-6315062 Caenorhabditis elegans
Exon126524   237   IV: 6315107-6315343 Caenorhabditis elegans
Exon126529   97   IV: 6315386-6315482 Caenorhabditis elegans
Exon126530   188   IV: 6315532-6315719 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.7a.1 6307739 6315719 1

1 Sequence

Length
2724

1 Sequence Ontology Term

Identifier Name Description
transcript