WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73B6BL.7c.1 Sequence Name  Y73B6BL.7c.1
Length (nt)  2184   Chromosome Location  IV: 6309697-6315427
Chromosome . Primary Identifier  IV Chromosome Location . Start  6309697
Chromosome Location . End  6315427 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6BL.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000820 csp-2 Y73B6BL.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B6BL.7c Y73B6BL.7c 2184   IV: 6309697-6309798

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.7c.1 6309697 6315427 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126523   102   IV: 6309697-6309798 Caenorhabditis elegans
Exon126525   188   IV: 6309900-6310087 Caenorhabditis elegans
Exon126527   698   IV: 6310615-6311312 Caenorhabditis elegans
Exon126529   78   IV: 6311451-6311528 Caenorhabditis elegans
Exon126531   69   IV: 6311582-6311650 Caenorhabditis elegans
Exon126533   111   IV: 6311966-6312076 Caenorhabditis elegans
Exon126535   111   IV: 6312338-6312448 Caenorhabditis elegans
Exon126537   251   IV: 6314423-6314673 Caenorhabditis elegans
Exon126541   202   IV: 6314719-6314920 Caenorhabditis elegans
Exon126544   95   IV: 6314968-6315062 Caenorhabditis elegans
Exon126547   237   IV: 6315107-6315343 Caenorhabditis elegans
Exon126549   42   IV: 6315386-6315427 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.7c.1 6309697 6315427 1

1 Sequence

Length
2184

1 Sequence Ontology Term

Identifier Name Description
transcript