WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73B6BL.6a.2 Sequence Name  Y73B6BL.6a.2
Length (nt)  1902   Chromosome Location  IV: 6324331-6326405
Chromosome . Primary Identifier  IV Chromosome Location . Start  6324331
Chromosome Location . End  6326405 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6BL.6a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022235 sqd-1 Y73B6BL.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B6BL.6a Y73B6BL.6a 918   IV: 6324345-6324638

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.6a.2 6324331 6326405 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126556   308   IV: 6324331-6324638 Caenorhabditis elegans
Exon126560   508   IV: 6324726-6325233 Caenorhabditis elegans
Exon126565   1086   IV: 6325320-6326405 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.6a.2 6324331 6326405 1

1 Sequence

Length
1902

1 Sequence Ontology Term

Identifier Name Description
transcript