WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73B6BL.5a.1 Sequence Name  Y73B6BL.5a.1
Length (nt)  1937   Chromosome Location  IV: 6329639-6333565
Chromosome . Primary Identifier  IV Chromosome Location . Start  6329639
Chromosome Location . End  6333565 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6BL.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004783 seu-1 Y73B6BL.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B6BL.5a Y73B6BL.5a 1716   IV: 6329639-6329653

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.5a.1 6329639 6333565 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126572   15   IV: 6329639-6329653 Caenorhabditis elegans
Exon126574   246   IV: 6329767-6330012 Caenorhabditis elegans
Exon126577   135   IV: 6330160-6330294 Caenorhabditis elegans
Exon126579   117   IV: 6330384-6330500 Caenorhabditis elegans
Exon126582   440   IV: 6331507-6331946 Caenorhabditis elegans
Exon126587   248   IV: 6331995-6332242 Caenorhabditis elegans
Exon126592   180   IV: 6332418-6332597 Caenorhabditis elegans
Exon126597   263   IV: 6332946-6333208 Caenorhabditis elegans
Exon126602   293   IV: 6333273-6333565 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.5a.1 6329639 6333565 1

1 Sequence

Length
1937

1 Sequence Ontology Term

Identifier Name Description
transcript